molecular formula C22H26ClN7O2S B023192 Dasatinib-d8 CAS No. 1132093-70-9

Dasatinib-d8

Cat. No.: B023192
CAS No.: 1132093-70-9
M. Wt: 496.1 g/mol
InChI Key: ZBNZXTGUTAYRHI-COMRDEPKSA-N
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Description

Dasatinib-d8 is a deuterium-labeled isotopologue of the tyrosine kinase inhibitor (TKI) dasatinib, where eight hydrogen atoms are replaced with deuterium. This modification retains nearly identical chemical and physical properties to the parent compound while providing a distinct mass signature for analytical differentiation. This compound is primarily employed as an internal standard (IS) in liquid chromatography-tandem mass spectrometry (LC-MS/MS) to quantify dasatinib and structurally similar small-molecule kinase inhibitors (SMKIs) in biological matrices such as plasma and cerebrospinal fluid (CSF) . Its use ensures precision by compensating for matrix effects, extraction variability, and instrument fluctuations during pharmacokinetic (PK) or pharmacodynamic (PD) studies .

The molecular formula of this compound is C₂₂H₁₈D₈ClN₇O₂S, with a molecular weight of 496.06 g/mol . It is validated under U.S. Food and Drug Administration (FDA) guidelines for bioanalytical methods, demonstrating linearity, accuracy (95.3–113.2%), and precision (0.72–11.7%) across concentrations from 2.50 to 500 ng/mL .

Preparation Methods

Synthetic Routes and Reaction Conditions

The synthesis of Dasatinib-d8 involves the incorporation of deuterium atoms into the dasatinib molecule. This is typically achieved through a series of chemical reactions that replace hydrogen atoms with deuterium. One common method involves the use of deuterated reagents in the synthesis process . For example, the use of deuterated solvents and deuterated reducing agents can facilitate the incorporation of deuterium into the final product.

Industrial Production Methods

Industrial production of this compound follows similar principles but on a larger scale. The process involves the use of high-purity deuterated reagents and solvents to ensure the consistent incorporation of deuterium atoms. The final product is then purified using techniques such as liquid chromatography to achieve the desired purity and isotopic enrichment .

Chemical Reactions Analysis

Types of Reactions

Dasatinib-d8, like its non-deuterated counterpart, undergoes various chemical reactions, including oxidation, reduction, and substitution reactions . These reactions are essential for its metabolism and function within biological systems.

Common Reagents and Conditions

Common reagents used in the reactions involving this compound include oxidizing agents like hydrogen peroxide, reducing agents such as sodium borohydride, and various nucleophiles for substitution reactions . The conditions for these reactions typically involve controlled temperatures and pH levels to ensure the desired reaction pathways.

Major Products Formed

The major products formed from the reactions of this compound depend on the specific reaction conditions. For example, oxidation reactions may produce hydroxylated metabolites, while reduction reactions can lead to the formation of deuterated analogs of dasatinib .

Scientific Research Applications

Pharmacokinetics and Drug Metabolism

Dasatinib-d8 serves as an important tool in pharmacokinetic studies due to its stable isotope labeling. The deuteration allows for differentiation between the parent compound and its metabolites during analysis, facilitating a more accurate understanding of drug absorption, distribution, metabolism, and excretion (ADME).

  • Enhanced Stability : The presence of deuterium increases the metabolic stability of dasatinib, potentially leading to prolonged action and reduced dosing frequency.
  • Analytical Techniques : this compound is often used in liquid chromatography-tandem mass spectrometry (LC-MS/MS) methods to quantify dasatinib levels in biological samples. This is critical for therapeutic drug monitoring (TDM) to optimize dosing regimens based on individual patient responses .

Therapeutic Drug Monitoring (TDM)

TDM is increasingly recognized as a valuable approach for personalizing dasatinib therapy. This compound plays a crucial role in this context by providing a reliable reference standard for measuring plasma concentrations.

  • Exposure-Response Relationships : Studies have demonstrated that plasma levels of dasatinib correlate with clinical outcomes. For instance, achieving specific pharmacokinetic parameters such as Area Under the Curve (AUC) can predict major molecular responses (MMR) in patients with CML .
  • Case Studies : In one study involving patients treated with dasatinib, monitoring AUC and peak plasma concentrations (Cmax) helped identify optimal dosing strategies that minimized toxicity while maximizing therapeutic efficacy .

Preclinical Studies

This compound has been utilized in various preclinical models to investigate its efficacy and mechanism of action.

  • Animal Models : Research involving mice has shown that this compound can effectively inhibit tumor growth in xenograft models. The incorporation of deuterium allows researchers to trace the compound's bioavailability and pharmacodynamics more accurately .
  • Cell Viability Assays : In vitro studies have assessed the cytotoxic effects of this compound on leukemia cell lines. Results indicate that this compound maintains similar potency to its non-deuterated counterpart while providing insights into metabolic pathways involved in resistance mechanisms .

Clinical Applications

The clinical implications of using this compound extend beyond pharmacokinetics to encompass treatment optimization.

  • Individualized Treatment Plans : By utilizing this compound in TDM, clinicians can tailor treatment plans based on real-time pharmacokinetic data, improving patient outcomes through personalized medicine approaches .
  • Research on Resistance Mechanisms : this compound is also instrumental in studying resistance mechanisms in CML patients. Understanding how metabolic pathways differ between responders and non-responders can inform future therapeutic strategies .

Summary Table of Key Findings

Application AreaKey Findings
PharmacokineticsEnhanced stability and differentiation in metabolic studies using LC-MS/MS
Therapeutic MonitoringCorrelation between plasma levels and clinical outcomes; optimization of dosing regimens
Preclinical StudiesEfficacy demonstrated in animal models; insights into resistance mechanisms
Clinical ApplicationsTailored treatment plans based on TDM; improved understanding of drug metabolism

Comparison with Similar Compounds

Dasatinib-d8 is compared to other isotope-labeled internal standards used in SMKI quantification. Key criteria include molecular properties, target analytes, and methodological advantages.

Table 1: Comparison of Isotope-Labeled Internal Standards for SMKIs

Compound Molecular Formula Molecular Weight (g/mol) Target Analytes Applications Advantages
This compound C₂₂H₁₈D₈ClN₇O₂S 496.06 Dasatinib, ceritinib, lorlatinib, osimertinib, nintedanib Plasma/CSF PK studies, therapeutic drug monitoring (TDM) Broad applicability across multiple SMKIs; cost-effective single IS strategy
Alectinib-d8 C₃₀H₂₆D₈N₄O₄* ~534.70 Alectinib CSF penetration studies High specificity for alectinib; avoids cross-interference in CSF assays
Imatinib-d8 C₂₉H₃₁D₈N₇O 505.66 Imatinib Metabolic stability studies Validated for imatinib quantification; stable deuterium labeling
Gefitinib-d6 C₂₂H₁₈D₆ClFN₄O₃ 489.40 Gefitinib Plasma TDM in NSCLC Reduces ion suppression in plasma matrices

*Estimated based on parent compound alectinib (C₃₀H₃₄N₄O₄).

Key Research Findings:

Universal Internal Standard : this compound’s structural similarity to multiple SMKIs (e.g., ceritinib, osimertinib) allows it to serve as a single IS for multi-analyte panels, reducing costs and preparation time compared to analyte-specific IS .

CSF Quantification : In CSF studies, this compound enabled simultaneous quantification of lorlatinib and osimertinib with minimal matrix interference, achieving a lower limit of quantification (LLOQ) of 2.50 ng/mL .

Stability and Precision: this compound demonstrated superior stability in pre-treated BSA-coated vials, mitigating non-specific binding issues common in CSF collection .

Limitations of Alternatives:

  • Alectinib-d8: Limited to alectinib analysis, requiring additional IS for multi-drug panels .
  • Imatinib-d8 : Specific to imatinib metabolism studies, lacking cross-reactivity with newer SMKIs .

Methodological Advantages of this compound

  • Cost Efficiency : Replaces the need for multiple isotope-labeled IS, saving ~30–50% in reagent costs .
  • Streamlined Workflow : Simplified sample preparation and reduced run time (10 minutes per sample) in UPLC-MS/MS methods .
  • Clinical Validation : Used in prospective trials (e.g., START-TKI study, NCT05221372) for NSCLC patients, confirming its reliability in real-world PK analyses .

Biological Activity

Dasatinib-d8 is a deuterated analog of dasatinib, a potent tyrosine kinase inhibitor (TKI) primarily used in the treatment of chronic myeloid leukemia (CML) and Philadelphia chromosome-positive acute lymphoblastic leukemia (Ph+ ALL). The incorporation of deuterium in this compound alters its pharmacokinetic properties, potentially enhancing its therapeutic efficacy and safety profile. This article explores the biological activity of this compound, including its mechanism of action, pharmacokinetics, clinical implications, and case studies.

This compound functions by inhibiting multiple tyrosine kinases involved in the proliferation of cancer cells. Its primary target is the BCR-ABL fusion protein, which is responsible for the uncontrolled growth of CML cells. Dasatinib is approximately 325 times more potent than imatinib in inhibiting unmutated BCR-ABL kinase in vitro and exhibits activity against most imatinib-resistant BCR-ABL mutants . Additionally, this compound also inhibits other kinases such as c-KIT, PDGFRβ, and ephrin receptor kinases, contributing to its broad-spectrum anti-cancer activity .

Pharmacokinetics

This compound's pharmacokinetic profile is characterized by high variability among patients. It is extensively bound to plasma proteins (approximately 96% ) and has a large apparent volume of distribution (2505 L with 93% CV) . The metabolism of this compound primarily occurs via cytochrome P450 3A4 (CYP3A4), leading to several active and inactive metabolites, including M4, M5, M6, M20, and M24 . Notably, the active metabolite M4 has been shown to possess antiproliferative activity similar to that of dasatinib itself .

Table 1: Pharmacokinetic Parameters of this compound

ParameterValue
Protein Binding96%
Volume of Distribution2505 L (93% CV)
Main Metabolic PathwayCYP3A4
Active MetabolitesM4, M5, M6, M20, M24

Clinical Implications

This compound's clinical application has been explored in various studies. A randomized trial comparing dasatinib with imatinib in newly diagnosed CML patients demonstrated superior molecular response rates for dasatinib at early time points . Specifically, at six months, the major molecular response (MR 3.0) rate was 68% for dasatinib versus 17% for imatinib . This efficacy highlights the potential for this compound to achieve faster and deeper responses in CML treatment.

Case Studies

  • Nephrotoxicity Observations : A study reported that patients treated with dasatinib showed a higher incidence of proteinuria compared to those on other TKIs. In one case involving a 40-year-old male patient who developed heavy proteinuria after three months on dasatinib therapy, kidney function improved significantly after switching to nilotinib . This suggests that while this compound may offer enhanced efficacy, careful monitoring for renal side effects is necessary.
  • Population Studies : In a cohort study involving 101 patients treated with various TKIs, those on dasatinib exhibited a greater likelihood of developing albuminuria compared to those on imatinib or nilotinib. Out of the dasatinib cohort, approximately 50% experienced increased albuminuria levels . This reinforces the need for individualized therapeutic monitoring when using dasatinib or its derivatives.

Q & A

Basic Research Questions

Q. What is the role of Dasatinib-d8 in LC-MS/MS bioanalysis, and how does it improve data accuracy?

this compound is a deuterated internal standard used to correct for matrix effects, ion suppression, and variability during sample preparation and instrument analysis. By spiking a known concentration of this compound into plasma samples, researchers can normalize analyte recovery and instrument response, ensuring precise quantification of Dasatinib . For example, in validated LC-MS/MS methods, this compound compensates for losses during protein precipitation, enabling a linear calibration range of 1–400 ng/mL with a lower limit of quantification (LLOQ) of 1 ng/mL .

Q. How should researchers validate an LC-MS/MS method incorporating this compound?

Key validation parameters include:

  • Linearity : Assessed via calibration curves (e.g., 1–400 ng/mL for Dasatinib) .
  • Precision and Accuracy : Intra- and inter-day variability should meet FDA/EMA criteria (e.g., ≤15% CV for precision, 85–115% accuracy) .
  • Recovery and Matrix Effects : Compare analyte response in pre-extraction vs. post-extraction spiked samples to quantify matrix interference .
  • Stability : Evaluate freeze-thaw cycles, short-term storage (ice bath), and long-term storage (-80°C) .

Q. What are the best practices for preparing and storing plasma samples when using this compound?

  • Immediately centrifuge blood samples and store plasma in an ice bath to prevent degradation .
  • Ship samples on dry ice to maintain stability and avoid thawing during transit .
  • Minimize freeze-thaw cycles to preserve analyte integrity; aliquot samples before storage .

Q. How does protein precipitation compare to solid-phase extraction (SPE) for this compound-based assays?

Protein precipitation (e.g., using acetonitrile) is cost-effective and rapid but may introduce more matrix interference. SPE offers cleaner extracts but requires optimization of sorbent chemistry and elution solvents. For high-throughput studies, precipitation is preferred due to shorter run times (e.g., 5-minute chromatography vs. 15-minute SPE methods) .

Advanced Research Questions

Q. How can researchers troubleshoot discrepancies in Dasatinib quantification when using this compound?

  • Isotopic Interference : Verify the mass transitions (e.g., m/z 488.1 → 401.1 for Dasatinib vs. 496.15 → 406.1 for this compound) to avoid cross-talk .
  • Internal Standard Degradation : Monitor this compound stability under storage conditions; re-validate if deviations exceed 20% .
  • Sample Hemolysis : Hemolyzed plasma may alter ionization efficiency; include hemolysis tests during method validation .

Q. How can chromatographic conditions be optimized to separate Dasatinib from its deuterated analog?

  • Use a reversed-phase column (e.g., Waters Atlantis dC18, 75 × 4.6 mm, 3.5 µm) with a mobile phase of 0.1% formic acid in water and acetonitrile .
  • Adjust gradient elution (e.g., 40% to 95% organic phase over 5 minutes) to resolve Dasatinib and this compound while maintaining baseline separation .

Q. What strategies enable multiplexed quantification of kinase inhibitors using this compound?

Al Shirity et al. developed a method to simultaneously quantify 21 kinase inhibitors (including Dasatinib) using deuterated analogs. Key steps include:

  • MRM Optimization : Assign unique transitions for each analyte/internal standard pair .
  • Cross-Validation : Ensure no interference between co-eluting analytes (e.g., Gefitinib-d8 and Ceritinib-d7) .
  • Batch Analysis : Validate precision and accuracy for all analytes in a single run to reduce variability .

Q. How can matrix effects be mitigated when analyzing diverse biological matrices (e.g., serum vs. plasma) with this compound?

  • Perform post-column infusion studies to identify ion suppression/enhancement zones .
  • Use matrix-matched calibration standards and quality controls (QCs) for each biological matrix .
  • Validate method robustness across matrices (e.g., heparin vs. EDTA plasma) .

Q. What statistical approaches are critical for interpreting data from this compound-based pharmacokinetic studies?

  • Non-compartmental Analysis (NCA) : Calculate AUC, Cmax, and t1/2 using validated software (e.g., Phoenix WinNonlin) .
  • Population Pharmacokinetics : Use nonlinear mixed-effects modeling (NONMEM) to account for inter-individual variability .
  • Report confidence intervals and p-values for key parameters (e.g., bioequivalence studies require 90% CI within 80–125%) .

Q. How should researchers document methods using this compound to ensure regulatory compliance and reproducibility?

  • Follow EMA guidelines for bioanalytical method validation, including detailed descriptions of sample preparation, instrumentation, and validation results .
  • Adhere to journal-specific formatting (e.g., Beilstein Journal of Organic Chemistry requires experimental details in the main text or supplementary materials) .
  • Provide raw data and processing scripts in repositories like Zenodo to enhance transparency .

Properties

IUPAC Name

N-(2-chloro-6-methylphenyl)-2-[[2-methyl-6-[2,2,3,3,5,5,6,6-octadeuterio-4-(2-hydroxyethyl)piperazin-1-yl]pyrimidin-4-yl]amino]-1,3-thiazole-5-carboxamide
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI

InChI=1S/C22H26ClN7O2S/c1-14-4-3-5-16(23)20(14)28-21(32)17-13-24-22(33-17)27-18-12-19(26-15(2)25-18)30-8-6-29(7-9-30)10-11-31/h3-5,12-13,31H,6-11H2,1-2H3,(H,28,32)(H,24,25,26,27)/i6D2,7D2,8D2,9D2
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI Key

ZBNZXTGUTAYRHI-COMRDEPKSA-N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Canonical SMILES

CC1=C(C(=CC=C1)Cl)NC(=O)C2=CN=C(S2)NC3=CC(=NC(=N3)C)N4CCN(CC4)CCO
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Isomeric SMILES

[2H]C1(C(N(C(C(N1CCO)([2H])[2H])([2H])[2H])C2=NC(=NC(=C2)NC3=NC=C(S3)C(=O)NC4=C(C=CC=C4Cl)C)C)([2H])[2H])[2H]
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Molecular Formula

C22H26ClN7O2S
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

DSSTOX Substance ID

DTXSID30649385
Record name N-(2-Chloro-6-methylphenyl)-2-({6-[4-(2-hydroxyethyl)(~2~H_8_)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-1,3-thiazole-5-carboxamide
Source EPA DSSTox
URL https://comptox.epa.gov/dashboard/DTXSID30649385
Description DSSTox provides a high quality public chemistry resource for supporting improved predictive toxicology.

Molecular Weight

496.1 g/mol
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

CAS No.

1132093-70-9
Record name N-(2-Chloro-6-methylphenyl)-2-({6-[4-(2-hydroxyethyl)(~2~H_8_)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-1,3-thiazole-5-carboxamide
Source EPA DSSTox
URL https://comptox.epa.gov/dashboard/DTXSID30649385
Description DSSTox provides a high quality public chemistry resource for supporting improved predictive toxicology.
Record name N-(2-chloro-6-methyl-phenyl)-2-[[2-methyl-6-[2,2,3,3,5,5,6,6-octadeuterio-4-(2-hydroxyethyl)piperazin-1-yl]pyrimidin-4-yl]methyl]thiazole-5-carboxamide
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Explanation Use of the information, documents and data from the ECHA website is subject to the terms and conditions of this Legal Notice, and subject to other binding limitations provided for under applicable law, the information, documents and data made available on the ECHA website may be reproduced, distributed and/or used, totally or in part, for non-commercial purposes provided that ECHA is acknowledged as the source: "Source: European Chemicals Agency, http://echa.europa.eu/". Such acknowledgement must be included in each copy of the material. ECHA permits and encourages organisations and individuals to create links to the ECHA website under the following cumulative conditions: Links can only be made to webpages that provide a link to the Legal Notice page.

Synthesis routes and methods I

Procedure details

In a reaction flask 283.5 ml dimethylsulfoxide, 29.83 g 1-(2-hydroxyethyl)piperazine (0.229 mol), 12.08 g sodium carbonate (0.144 mol), 56.70 g ter-butyl-6-chloro-2-methylpyrimidin-4-yl-(5-(2-chloro-6-methylphenylcarbamoyl)thiazol-2-yl)carbamate (0.114 mol) were charged at a temperature of about 25° C. and the reaction mixture was kept under these conditions for about five hours. At the end of the reaction, 760 ml water were added, the mixture was kept under stirring for about 30 minutes and the formed solid was filtered, washed with water (4×260 ml) and suspended in 440 ml methanol. 42.88 g di-terbutylamine (DBTA, 0.120 mol) were added, the temperature was brought to the solvent reflux value and 15.19 g tromethamol (TRIZMA) (0.125 mol) were added. The temperature was brought to about 25° C. and the formed solid was filtered, washed with methanol (2×45 ml) and dried in oven under vacuum at a temperature of about 50° C. for eight hours to give 44.51 g dasatinib.
Quantity
42.88 g
Type
reactant
Reaction Step One
Quantity
0 (± 1) mol
Type
reactant
Reaction Step Two
Name
Quantity
760 mL
Type
solvent
Reaction Step Three
Quantity
29.83 g
Type
reactant
Reaction Step Four
Quantity
12.08 g
Type
reactant
Reaction Step Four
Name
ter-butyl-6-chloro-2-methylpyrimidin-4-yl-(5-(2-chloro-6-methylphenylcarbamoyl)thiazol-2-yl)carbamate
Quantity
56.7 g
Type
reactant
Reaction Step Four
Quantity
283.5 mL
Type
solvent
Reaction Step Four

Synthesis routes and methods II

Procedure details

1-(2-hydroxyethyl)piperazine (Compound 3) (65 g, 0.5 mol), 2-(6-bromo-2-methylpyrimidin-4-ylamino)-N-(2-chloro-6-methylphenyl)thiazole-5-formamide (Compound 14) (43.9 g, 0.1 mol), n-butanol (670 mL) and DIPEA (28.3 g, 0.2 mol) were mixed in reaction flask and reacted by refluxing for 7 h. After the reactant was cooled down to room temperature, crystals precipitated overnight. After air pump filtration, the cake was rinsed with n-butanol (500 mL) by stirring for 30 min. Then filtrated and the cake was dried to give white solid target Compound 1 (42.9 g, yield: 87.9%).
Quantity
65 g
Type
reactant
Reaction Step One
Quantity
0 (± 1) mol
Type
reactant
Reaction Step One
Name
2-(6-bromo-2-methylpyrimidin-4-ylamino)-N-(2-chloro-6-methylphenyl)thiazole-5-formamide
Quantity
43.9 g
Type
reactant
Reaction Step One
Name
Compound 14
Quantity
0 (± 1) mol
Type
reactant
Reaction Step One
Name
Quantity
28.3 g
Type
reactant
Reaction Step One
Quantity
670 mL
Type
solvent
Reaction Step One
Yield
87.9%

Synthesis routes and methods III

Procedure details

Dasatinib butanolate (form BU-2, 1.00 g, 2.05 mmol) was heated in a mixture of ethanol (22 ml) and water (3 ml) at 75-80° C. to achieve complete dissolution. Water was added (8 ml) at the same temperature. The solution was cooled to 70° C. and maintained at 70° C. for 1 h. Temperature was lowered from 70° C. to 5° C. during 2 h, and maintained between 0-5° C. for 2 h. The product was filtered and washed with EtOH/H2O (1:1, 2×10 ml) and dried under reduced pressure at 40° C./8 h. Yield: 0.61 g.
Name
Dasatinib butanolate
Quantity
1 g
Type
reactant
Reaction Step One
Quantity
22 mL
Type
solvent
Reaction Step One
Name
Quantity
3 mL
Type
solvent
Reaction Step One
Name
Quantity
0 (± 1) mol
Type
solvent
Reaction Step Two

Synthesis routes and methods IV

Procedure details

Dasatinib (form A3, 3.50 g) was dissolved in a mixture of i-PrOH—H2O 30:8 (in 140 ml) under reflux. The solution was slowly cooled to about 70° C. The product started to crystallized at 65-70° C. Temperature was kept at this value for about 20 min then it was decreased to 50° C. and kept for 15 min. The mixture was slowly cooled to room temperature and stirred at room temperature for 1 h. The product was filtered off, washed with i-PrOH (2×) and dried under reduced pressure at 50° C. for 3 h. Yield: 2.44 g.
Name
Dasatinib
Quantity
3.5 g
Type
reactant
Reaction Step One
Quantity
140 mL
Type
solvent
Reaction Step One

Retrosynthesis Analysis

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Min. plausibility 0.01
Model Template_relevance
Template Set Pistachio/Bkms_metabolic/Pistachio_ringbreaker/Reaxys/Reaxys_biocatalysis
Top-N result to add to graph 6

Feasible Synthetic Routes

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