molecular formula C16H17NO6 B031883 Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate CAS No. 88150-75-8

Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate

Cat. No.: B031883
CAS No.: 88150-75-8
M. Wt: 319.31 g/mol
InChI Key: RIGKLAOKQFKWNN-UHFFFAOYSA-N
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Description

Preparation Methods

Synthetic Routes and Reaction Conditions

The synthesis of Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate typically involves the condensation of an aromatic primary amine with a maleic anhydride derivative, leading to the formation of the isoindoline-1,3-dione scaffold . Another approach involves the reaction of phthalic anhydride with glycine and acetic acid in the presence of triethylamine in toluene as a solvent .

Industrial Production Methods

Industrial production methods for this compound are not extensively documented, but they likely involve similar synthetic routes with optimization for large-scale production. This includes the use of efficient catalysts and solvent systems to maximize yield and purity.

Chemical Reactions Analysis

Types of Reactions

Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate undergoes various types of chemical reactions, including:

    Oxidation: This compound can be oxidized to introduce additional functional groups.

    Reduction: Reduction reactions can modify the isoindoline-1,3-dione moiety.

    Substitution: Electrophilic and nucleophilic substitution reactions can occur at various positions on the molecule.

Common Reagents and Conditions

Common reagents used in these reactions include oxidizing agents like potassium permanganate, reducing agents such as lithium aluminum hydride, and various nucleophiles and electrophiles for substitution reactions .

Major Products

The major products formed from these reactions depend on the specific conditions and reagents used. For example, oxidation can lead to the formation of carboxylic acids, while reduction can yield amines or alcohols.

Mechanism of Action

The mechanism of action of Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate involves its interaction with specific molecular targets and pathways. The isoindoline-1,3-dione moiety is known to interact with enzymes and receptors, modulating their activity and leading to various biological effects . The exact pathways and targets depend on the specific application and context of use.

Comparison with Similar Compounds

Chemical Identity :

  • IUPAC Name: Ethyl 4-[2-(1,3-dioxoisoindol-2-yl)ethoxy]-3-oxobutanoate
  • CAS Number : 88150-75-8
  • Molecular Formula: C₁₆H₁₇NO₆
  • Molecular Weight : 319.31 g/mol .
  • Synonyms: Ethyl-4(2-Phthalimido Ethoxy)Acetoacetate, 4-(2-Phthalimidoethoxy)acetoacetic Acid Ethyl Ester .

Structural Features: The compound consists of a phthalimide (1,3-dioxoisoindoline) group linked via an ethoxy chain to a 3-oxobutanoate ethyl ester. This structure confers both lipophilic (phthalimide) and reactive (β-keto ester) properties, making it a versatile intermediate in organic synthesis .

Applications :
Primarily used as a synthetic intermediate in pharmaceuticals (e.g., related to Amlodipine impurities) and isotopomer synthesis .

Physical Properties :

  • Boiling Point : 479.7 ± 30.0 °C (at 760 mmHg) .
  • Storage : Room temperature, dry conditions .

Structural Analogues

(a) Ethyl 3-Oxobutanoate

  • Formula : C₆H₁₀O₃
  • Molecular Weight : 130.14 g/mol.
  • Key Differences : Lacks the phthalimidoethoxy group. Simpler structure with a single β-keto ester functionality.
  • Applications: Precursor for synthesizing chlorinated derivatives (e.g., ethyl 2-chloro-3-oxobutanoate) used in isotopomer production .

(b) Ethyl 4-[2-(Dimethylamino)ethoxy]-3-oxobutanoate

  • CAS : 84157-65-3
  • Formula: C₁₀H₁₉NO₄
  • Molecular Weight : 217.26 g/mol.
  • Key Differences: Substitutes phthalimide with a dimethylamino group, introducing basicity. This enhances solubility in acidic media but reduces thermal stability compared to the phthalimide analogue .

(c) Ethyl 4-(2,4-Difluorophenyl)-4-oxobutyrate

  • CAS : 1041553-00-7
  • Formula : C₁₂H₁₂F₂O₃
  • Molecular Weight : 242.22 g/mol.
  • Key Differences : Contains a fluorinated aromatic ring instead of phthalimide. Fluorine atoms increase electronegativity, improving metabolic stability in pharmaceutical contexts .

Functional Analogues

(a) Ethyl 2-Chloro-3-oxobutanoate

  • Formula : C₆H₉ClO₃
  • Molecular Weight : 164.59 g/mol.
  • Key Differences : Chlorine substituent at the α-position enhances electrophilicity, facilitating nucleophilic substitutions. Used in synthesizing isotopically labeled 1-chloroacetone .

(b) Cetirizine Ethyl Ester

  • Structure : Contains a piperazine-ethoxy-acetic acid ethyl ester backbone.
  • Key Differences : Piperazine group introduces basic nitrogen atoms, altering pharmacokinetics (e.g., antihistamine activity). The absence of a phthalimide reduces lipophilicity .

Comparative Data Table

Compound Molecular Formula Molecular Weight (g/mol) Key Functional Groups Applications
Ethyl 4-(2-(1,3-Dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate C₁₆H₁₇NO₆ 319.31 Phthalimide, β-keto ester Pharmaceutical intermediates, isotopomers
Ethyl 3-Oxobutanoate C₆H₁₀O₃ 130.14 β-keto ester Precursor for chlorinated derivatives
Ethyl 4-[2-(Dimethylamino)ethoxy]-3-oxobutanoate C₁₀H₁₉NO₄ 217.26 Dimethylamino, β-keto ester Basic intermediates, solubility studies
Ethyl 4-(2,4-Difluorophenyl)-4-oxobutyrate C₁₂H₁₂F₂O₃ 242.22 Fluorophenyl, β-keto ester Agrochemicals, bioactive molecules

Biological Activity

Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate is a compound with significant potential in medicinal chemistry, particularly in the context of anticancer research. This article explores its biological activity, focusing on its synthesis, cytotoxic effects, and structure-activity relationships.

  • Chemical Formula : C16_{16}H17_{17}NO6_6
  • Molecular Weight : 319.31 g/mol
  • CAS Number : 88150-75-8
  • IUPAC Name : Ethyl 4-[2-(1,3-dioxoisoindolin-2-yl)ethoxy]-3-oxobutanoate
  • PubChem CID : 9840027

The synthesis of this compound typically involves the reaction of ethyl chloroacetate with various heterocycles. The resulting derivatives are evaluated for their cytotoxic properties against different cancer cell lines, including MCF-7 (breast cancer) and HeLa (cervical cancer) cells. The mechanism of action is believed to involve the inhibition of key growth factors and enzymes that are crucial for cancer cell proliferation.

Cytotoxic Activity

Recent studies have highlighted the cytotoxic activity of this compound, demonstrating its effectiveness against various cancer cell lines. For instance, a study evaluated several derivatives containing phthalimide moieties and reported significant cytotoxic effects:

Table 1: Cytotoxic Activity of Related Compounds

CompoundIC50_{50} (μM) MCF-7IC50_{50} (μM) HeLa
3a87 ± 3.577 ± 3.3
3b86 ± 3.971 ± 3.6
3c92 ± 3.367 ± 4.1
3d 73 ± 3 29 ± 2.9
Paclitaxel5.25 - 11.03 (μg/mL)7.76 (μg/mL)

Compound 3d , which contains two phthalimide structures, exhibited the highest cytotoxicity with an IC50_{50} value of 29 μM against the HeLa cell line, indicating a strong potential for further development as an anticancer agent .

Structure-Activity Relationship (SAR)

The structure-activity relationship studies indicate that the presence of specific functional groups significantly enhances the biological activity of these compounds. The incorporation of phthalimide moieties appears to increase lipophilicity, which may facilitate better interaction with biological targets .

Key Findings:

  • Lipophilicity : Increased lipophilic character correlates with enhanced cytotoxicity.
  • Functional Groups : The presence of electron-withdrawing groups often improves potency by stabilizing reactive intermediates.
  • Heterocyclic Scaffolds : Five-membered heterocycles are crucial for maintaining biological activity due to their ability to mimic natural substrates.

Case Studies

Research has demonstrated that derivatives of this compound can induce apoptosis in cancer cells through various pathways:

  • Apoptosis Induction : Compounds were shown to activate caspase pathways leading to programmed cell death.
  • Inhibition of Growth Factors : Studies indicate that these compounds can inhibit key signaling pathways involved in tumor growth and metastasis.

Q & A

Q. Basic: What are the recommended synthetic routes for Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate, and how can purity be optimized?

The compound is synthesized via multicomponent reactions , such as coupling phthalimide derivatives with ethyl acetoacetate intermediates. A key step involves introducing the 1,3-dioxoisoindolin-2-yl ethoxy group through nucleophilic substitution or esterification under anhydrous conditions . To optimize purity:

  • Use column chromatography (silica gel, ethyl acetate/hexane eluent) for separation.
  • Monitor reaction progress via thin-layer chromatography (TLC) .
  • Recrystallize from ethanol or methanol to achieve >95% purity, as reported by suppliers .

Q. Basic: How should researchers handle and store this compound to ensure stability?

Conflicting storage recommendations exist:

  • Refrigeration (2–8°C) is advised by Fujifilm Wako to prevent decomposition of the β-ketoester moiety .
  • Room temperature (dry conditions) is suggested by other suppliers, assuming short-term stability .
    Methodological guidance :
  • Conduct accelerated stability studies (e.g., 40°C/75% RH for 1 week) to determine degradation kinetics.
  • Store under inert gas (N₂/Ar) to minimize hydrolysis of the ester group .

Q. Intermediate: What spectroscopic techniques are critical for characterizing this compound?

Essential methods :

  • ¹H/¹³C NMR : Confirm the presence of the phthalimide ring (δ 7.8–8.0 ppm for aromatic protons) and β-ketoester (δ 3.5–4.5 ppm for ethoxy groups) .
  • FT-IR : Verify ester C=O stretches (~1730 cm⁻¹) and phthalimide C=O (~1770 cm⁻¹) .
  • HRMS : Validate molecular weight (C₁₆H₁₇NO₆, [M+H]⁺ = 320.1128) .

Q. Advanced: How can researchers resolve contradictions in reported melting points and boiling points?

reports a boiling point of 479.7±30.0°C but no melting point , while other sources omit thermal data.
Approach :

  • Perform differential scanning calorimetry (DSC) to determine decomposition temperature.
  • Use thermogravimetric analysis (TGA) to assess volatility under reduced pressure.
  • Compare results with computational predictions (e.g., COSMO-RS for boiling point estimation).

Q. Advanced: What mechanistic insights exist for the reactivity of the β-ketoester group in this compound?

The β-ketoester moiety undergoes:

  • Knoevenagel condensation with aldehydes, forming α,β-unsaturated esters.
  • Michael addition with nucleophiles (e.g., amines), useful for constructing heterocycles .
    Key considerations :
  • Stabilize enolate intermediates using Lewis acids (e.g., MgCl₂).
  • Monitor pH to avoid hydrolysis of the ester group during reactions .

Q. Advanced: How can computational modeling guide the design of derivatives for biological applications?

Strategies :

  • Perform docking studies to evaluate interactions with targets like tyrosyl-DNA phosphodiesterase 1 (TDP1), leveraging its phthalimide scaffold’s DNA-binding affinity .
  • Use QSAR models to predict solubility (LogP = 1.2) and bioavailability.
  • Simulate metabolic pathways (e.g., esterase-mediated hydrolysis) using ADMET predictors .

Q. Advanced: What are the implications of conflicting purity grades (85% vs. 97%) across suppliers?

Impact : Lower purity (85%) may introduce side products (e.g., hydrolyzed β-ketoester) affecting reaction yields.
Mitigation :

  • HPLC-PDA analysis to quantify impurities.
  • Pre-purify commercial batches via flash chromatography if purity <95% .

Q. Cross-Disciplinary: How is this compound applied in materials science or catalysis?

  • Coordination chemistry : The phthalimide group chelates metals (e.g., Cu²⁺), enabling use in catalytic systems .
  • Polymer synthesis : Acts as a monomer in step-growth polymerization for functional polyesters.

Properties

IUPAC Name

ethyl 4-[2-(1,3-dioxoisoindol-2-yl)ethoxy]-3-oxobutanoate
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI

InChI=1S/C16H17NO6/c1-2-23-14(19)9-11(18)10-22-8-7-17-15(20)12-5-3-4-6-13(12)16(17)21/h3-6H,2,7-10H2,1H3
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI Key

RIGKLAOKQFKWNN-UHFFFAOYSA-N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Canonical SMILES

CCOC(=O)CC(=O)COCCN1C(=O)C2=CC=CC=C2C1=O
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Molecular Formula

C16H17NO6
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

DSSTOX Substance ID

DTXSID90431687
Record name Ethyl 4-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethoxy]-3-oxobutanoate
Source EPA DSSTox
URL https://comptox.epa.gov/dashboard/DTXSID90431687
Description DSSTox provides a high quality public chemistry resource for supporting improved predictive toxicology.

Molecular Weight

319.31 g/mol
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

CAS No.

88150-75-8
Record name Ethyl 4-[2-(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)ethoxy]-3-oxobutanoate
Source CAS Common Chemistry
URL https://commonchemistry.cas.org/detail?cas_rn=88150-75-8
Description CAS Common Chemistry is an open community resource for accessing chemical information. Nearly 500,000 chemical substances from CAS REGISTRY cover areas of community interest, including common and frequently regulated chemicals, and those relevant to high school and undergraduate chemistry classes. This chemical information, curated by our expert scientists, is provided in alignment with our mission as a division of the American Chemical Society.
Explanation The data from CAS Common Chemistry is provided under a CC-BY-NC 4.0 license, unless otherwise stated.
Record name Ethyl 4-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethoxy]-3-oxobutanoate
Source EPA DSSTox
URL https://comptox.epa.gov/dashboard/DTXSID90431687
Description DSSTox provides a high quality public chemistry resource for supporting improved predictive toxicology.
Record name Butanoic acid, 4-[2-(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)ethoxy]-3-oxo-, ethyl ester
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Synthesis routes and methods I

Procedure details

To a slurry of sodium hydride (57% dispersion in oil, 66.1 g; 1.57M), in tetrahydrofuran (500 ml) cooled to 0° under nitrogen was added 2-phthalimidoethanol (150 g; 0.785M) followed by ethyl 4-chloroacetoacetate (129 g; 0.785M) in tetrahydrofuran (250 ml) over 1 hour. The mixture was stirred at room temperature overnight then poured into a mixture of 1M hydrochloric acid (800 ml) and ethyl acetate (750 ml). The organic phase was separated and the solvent was evaporated at reduced pressure. The residue separated into two layers and the upper layer of mineral oil was removed to leave the title compound (243 g) as a crude product which was used without further purification.
Quantity
66.1 g
Type
reactant
Reaction Step One
Quantity
500 mL
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solvent
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150 g
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reactant
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129 g
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reactant
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250 mL
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solvent
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800 mL
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Quantity
750 mL
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Reaction Step Four

Synthesis routes and methods II

Procedure details

Sodium hydride (57% [by weight] in oil, 66.1 g) was stirred in dry tetrahydrofuran (500 ml) under nitrogen at -10° while N-(2-hydroxyethyl)phthalimide (150 g) was added. To this slurry was added at -10° a solution of ethyl 4-chloroacetoacetate (129.3 g), in dry tetrahydrofuran, over 1 hour. The reaction mixture was then allowed to warm to room temperature and stirring was continued for 18 hours. This mixture was poured into 1N hydrochloric acid (800 ml) and ethyl acetate was added (750 ml). The aqueous layer was washed with ethyl acetate (300 ml) and the organic solutions were combined. After washing with water (300 ml), the ethyl acetate was evaporated to give the title compound as a crude oil (243 g), sufficiently pure for further use.
Quantity
66.1 g
Type
reactant
Reaction Step One
Quantity
150 g
Type
reactant
Reaction Step One
Quantity
500 mL
Type
solvent
Reaction Step One
Quantity
129.3 g
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reactant
Reaction Step Two
Quantity
800 mL
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reactant
Reaction Step Three
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0 (± 1) mol
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Reaction Step Three
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0 (± 1) mol
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Reaction Step Four

Retrosynthesis Analysis

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Strategy Settings

Precursor scoring Relevance Heuristic
Min. plausibility 0.01
Model Template_relevance
Template Set Pistachio/Bkms_metabolic/Pistachio_ringbreaker/Reaxys/Reaxys_biocatalysis
Top-N result to add to graph 6

Feasible Synthetic Routes

Reactant of Route 1
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Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate
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Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate
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Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate
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Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate
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Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate
Reactant of Route 6
Ethyl 4-(2-(1,3-dioxoisoindolin-2-yl)ethoxy)-3-oxobutanoate

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