molecular formula C16H15F6N5O B1680988 Sitagliptin CAS No. 486460-32-6

Sitagliptin

Cat. No.: B1680988
CAS No.: 486460-32-6
M. Wt: 407.31 g/mol
InChI Key: MFFMDFFZMYYVKS-SECBINFHSA-N
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Description

Historical Development and Discovery

The discovery of sitagliptin emerged from efforts to address the limitations of existing therapies for type 2 diabetes mellitus (T2DM). In 1999, Merck & Co. initiated a program targeting dipeptidyl peptidase-4 (DPP-4) inhibition, inspired by the glucoregulatory effects of incretin hormones like glucagon-like peptide-1 (GLP-1) and glucose-dependent insulinotropic polypeptide (GIP). Early candidates, such as isoleucyl thiazolidide, demonstrated efficacy but caused toxicity in preclinical studies due to off-target inhibition of DPP-8 and DPP-9. This led to a strategic pivot toward developing highly selective DPP-4 inhibitors.

Medicinal chemistry efforts focused on β-amino acid derivatives, culminating in the identification of a triazolopiperazine scaffold with enhanced metabolic stability and selectivity. This compound, the first DPP-4 inhibitor approved by the U.S. Food and Drug Administration (FDA) in October 2006, represented a breakthrough in oral antidiabetic therapy. Its development marked a shift toward mechanisms that potentiate endogenous incretin activity while minimizing hypoglycemia risk.

Role in Diabetes Management

This compound exerts its antidiabetic effects through selective, reversible inhibition of DPP-4, an enzyme responsible for degrading GLP-1 and GIP. By preserving active incretins, this compound enhances glucose-dependent insulin secretion and suppresses glucagon release, thereby reducing fasting and postprandial hyperglycemia. Clinical trials demonstrate an average reduction in hemoglobin A1c (HbA1c) of 0.7% compared to placebo, with minimal risk of hypoglycemia or weight gain.

Comparative Efficacy in Clinical Settings

A meta-analysis of six randomized controlled trials (2,410 participants) found this compound non-inferior to sulfonylureas in HbA1c reduction when combined with metformin. The PIONEER 3 trial further highlighted this compound’s durability, showing sustained HbA1c reductions of 0.5% after 78 weeks compared to placebo. Unlike sulfonylureas, this compound’s glucose-dependent mechanism avoids excessive insulin secretion, making it suitable for patients prone to hypoglycemia.

Parameter This compound Sulfonylureas Placebo
HbA1c reduction (%) -0.7 -0.7 -0.1
Hypoglycemia incidence 5% 20–30% 3%
Weight change (kg) Neutral +1.5–2.5 Neutral

Structural Classification and Nomenclature

This compound belongs to the β-amino acid class of compounds, characterized by a triazolopiperazine core substituted with fluorine-rich aromatic groups. Its systematic IUPAC name is (R)-3-amino-1-[3-(trifluoromethyl)-5,6,7,8-tetrahydro-triazolo[4,3-a]pyrazin-7-yl]-4-(2,4,5-trifluorophenyl)butan-1-one. The structure features:

  • A triazolopiperazine moiety that confers DPP-4 selectivity by interacting with residues Ser630 and Tyr662.
  • Trifluoromethyl and trifluorophenyl groups enhancing binding affinity and metabolic stability.

Key Chemical Properties

Property Value Source
Molecular formula C₁₆H₁₅F₆N₅O
Molecular weight 407.31 g/mol
CAS Registry Number 486460-32-6 (free base)
654671-78-0 (phosphate salt)
Optical rotation [α]D = -74.4° (c = 1.0 in water)

The phosphate salt form (this compound phosphate monohydrate) is commonly used in pharmaceutical formulations due to improved solubility and bioavailability. X-ray crystallography reveals that the trifluorophenyl group occupies the S1 pocket of DPP-4, while the triazolopiperazine moiety stabilizes the enzyme-inhibitor complex via hydrophobic interactions.

Properties

IUPAC Name

(3R)-3-amino-1-[3-(trifluoromethyl)-6,8-dihydro-5H-[1,2,4]triazolo[4,3-a]pyrazin-7-yl]-4-(2,4,5-trifluorophenyl)butan-1-one
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI

InChI=1S/C16H15F6N5O/c17-10-6-12(19)11(18)4-8(10)3-9(23)5-14(28)26-1-2-27-13(7-26)24-25-15(27)16(20,21)22/h4,6,9H,1-3,5,7,23H2/t9-/m1/s1
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI Key

MFFMDFFZMYYVKS-SECBINFHSA-N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Canonical SMILES

C1CN2C(=NN=C2C(F)(F)F)CN1C(=O)CC(CC3=CC(=C(C=C3F)F)F)N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Isomeric SMILES

C1CN2C(=NN=C2C(F)(F)F)CN1C(=O)C[C@@H](CC3=CC(=C(C=C3F)F)F)N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Molecular Formula

C16H15F6N5O
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

DSSTOX Substance ID

DTXSID70197572
Record name Sitagliptin
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Molecular Weight

407.31 g/mol
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Physical Description

Solid
Record name Sitagliptin
Source Human Metabolome Database (HMDB)
URL http://www.hmdb.ca/metabolites/HMDB0015390
Description The Human Metabolome Database (HMDB) is a freely available electronic database containing detailed information about small molecule metabolites found in the human body.
Explanation HMDB is offered to the public as a freely available resource. Use and re-distribution of the data, in whole or in part, for commercial purposes requires explicit permission of the authors and explicit acknowledgment of the source material (HMDB) and the original publication (see the HMDB citing page). We ask that users who download significant portions of the database cite the HMDB paper in any resulting publications.

Solubility

3.40e-02 g/L
Record name Sitagliptin
Source Human Metabolome Database (HMDB)
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Color/Form

Viscous liquid

CAS No.

486460-32-6
Record name Sitagliptin
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Record name Sitagliptin
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Record name (3R)-3-amino-1-[3-(trifluoromethyl)-5,6-dihydro[1,2,4]triazolo[4,3-a]pyrazin-7(8H)-yl]-4-(2,4,5-trifluorophenyl)butan-1-one
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Record name SITAGLIPTIN
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Record name Sitagliptin
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Explanation HMDB is offered to the public as a freely available resource. Use and re-distribution of the data, in whole or in part, for commercial purposes requires explicit permission of the authors and explicit acknowledgment of the source material (HMDB) and the original publication (see the HMDB citing page). We ask that users who download significant portions of the database cite the HMDB paper in any resulting publications.

Preparation Methods

    Synthetic Routes: Sitagliptin is synthesized through various chemical steps. One common synthetic route involves the condensation of an amino acid derivative (3-amino-1-adamantanol) with a cyanoacetyl derivative (cyanoguanidine). This reaction yields the core structure of this compound.

    Industrial Production: The industrial production of this compound involves large-scale synthesis using optimized conditions. The process typically includes purification steps to obtain high-purity this compound for pharmaceutical use.

  • Chemical Reactions Analysis

      Reactivity: Sitagliptin undergoes various chemical reactions, including oxidation, reduction, and substitution reactions.

      Common Reagents and Conditions: Specific reagents and conditions depend on the desired transformation. For example

      Major Products: The major products formed during these reactions include intermediates and final derivatives of this compound.

  • Scientific Research Applications

    Glycemic Control in Type 2 Diabetes

    Sitagliptin enhances glycemic control by increasing incretin levels, which leads to improved insulin secretion and reduced glucagon levels. Clinical trials have demonstrated its efficacy in lowering fasting plasma glucose and glycated hemoglobin (HbA1c) levels.

    Clinical Trial Findings

    • A study involving older adults showed significant reductions in fasting plasma glucose (−27.2 mg/dL) and HbA1c (−0.61%) after 12 months of this compound treatment compared to control groups .
    • In another trial, this compound combined with metformin resulted in better glycemic control than either agent alone .
    StudyPopulationDurationHbA1c ReductionFPG Reduction
    Older adults (≥70 years)12 months−0.61%−27.2 mg/dL
    Type 2 diabetes patientsVariesSignificant improvement vs. monotherapyNot specified

    Cardiovascular Safety

    The cardiovascular safety profile of this compound has been extensively studied, particularly through the TECOS trial, which assessed cardiovascular outcomes in type 2 diabetes patients.

    Key Findings from TECOS Trial

    • This compound was found to be non-inferior to placebo concerning major adverse cardiovascular events (MACE), with no significant increase in hospitalization for heart failure or all-cause mortality .
    • The trial involved over 14,000 patients and concluded that this compound does not adversely affect cardiovascular health .

    Renal Function Impact

    This compound's effects on renal function have also been a focus of research, particularly in patients with pre-existing renal conditions.

    Research Insights

    • A study indicated that while there was a slight reduction in estimated glomerular filtration rate (eGFR), it was comparable between this compound and placebo groups over a 48-month period .
    • Another investigation highlighted that this compound could be safely used in patients with varying degrees of renal impairment, making it a versatile option for managing diabetes in this population .

    Applications Beyond Diabetes Management

    Emerging research suggests potential applications of this compound beyond glycemic control:

    • Weight Management : Studies indicate that this compound may contribute to weight neutrality or modest weight loss, which is beneficial for overweight patients with type 2 diabetes.
    • Combination Therapy : this compound is often used in combination with other antidiabetic agents to enhance overall treatment efficacy. For instance, its combination with metformin has shown synergistic effects on glycemic control .

    Case Studies and Real-world Applications

    Several case studies have documented the real-world effectiveness of this compound:

    • A case involving an elderly patient with multiple comorbidities demonstrated significant improvements in glycemic control without serious adverse effects after initiating this compound therapy.
    • Another case highlighted the successful use of this compound in a patient with type 2 diabetes who experienced intolerable side effects from other medications, showcasing its tolerability profile.

    Mechanism of Action

      DPP-4 Inhibition: Sitagliptin inhibits DPP-4, an enzyme that rapidly degrades incretin hormones such as glucagon-like peptide-1 (GLP-1) and glucose-dependent insulinotropic peptide (GIP).

      Increased GLP-1 and GIP: By inhibiting DPP-4, this compound increases the levels of active GLP-1 and GIP. These hormones enhance insulin release and reduce glucagon secretion in a glucose-dependent manner.

      Clinical Effects: In patients with type 2 diabetes, this compound lowers HbA1c, fasting blood glucose, and postprandial glucose levels.

  • Comparison with Similar Compounds

    Table 1: In Vitro and Pharmacokinetic Profiles of DPP-4 Inhibitors

    Compound IC50 (nM) Bioavailability Half-life (hr) Renal Excretion Dose Adjustment in Renal Impairment
    This compound 19 87% 12.4 80% Yes
    Linagliptin 1 30% 12–24 <5% No
    Alogliptin 24 100% 21 60–70% Yes
    Saxagliptin 50 67% 2.5–6.0 75% Yes

    Comparison with Non-DPP-4 Inhibitors

    GLP-1 Receptor Agonists (e.g., Liraglutide)

    • Efficacy : Liraglutide (a GLP-1 agonist) reduces HbA1c more effectively than this compound (ΔHbA1c: −1.2% vs. −0.7%) and promotes weight loss .
    • Cost-Effectiveness : Liraglutide is cost-effective compared to this compound in obese patients due to superior weight and HbA1c benefits .

    α-Glucosidase Inhibitors (e.g., Acarbose)

    • Natural compounds like kaempferol (from Hibiscus surattensis) show higher DPP-4 inhibitory activity (IC50 = 7.37 μg/mL ) than this compound (25.56 μg/mL ) in vitro, but clinical data are lacking .

    Molecular and Pharmacokinetic Insights

    • Binding Interactions: this compound forms hydrogen bonds with Tyr662, Trp629, and His740 in DPP-4’s active site, similar to novel inhibitors like ZINC000003015356, which exhibits higher binding energy (−10.8 kcal/mol vs. This compound’s −10.0 kcal/mol) .
    • Stereoselectivity : The R-enantiomer of this compound analogs shows better docking scores than S-enantiomers, aligning with this compound’s eudysmic ratio .

    Biological Activity

    Sitagliptin is a dipeptidyl peptidase-4 (DPP-4) inhibitor widely used in the management of type 2 diabetes mellitus. Its primary mechanism involves the inhibition of DPP-4, an enzyme that degrades incretin hormones, thereby enhancing the levels of active glucagon-like peptide-1 (GLP-1) and glucose-dependent insulinotropic peptide (GIP). This article explores the biological activity of this compound, highlighting its effects on glucose metabolism, beta-cell function, and its broader implications in diabetes management.

    This compound's primary action is to increase the levels of incretin hormones, which play a crucial role in glucose homeostasis. By inhibiting DPP-4, this compound leads to:

    • Increased GLP-1 and GIP Levels : this compound enhances the secretion of GLP-1 and GIP, which stimulate insulin release in response to meals and suppress glucagon secretion .
    • Improved Beta-Cell Function : Studies indicate that this compound may enhance beta-cell function and mass in individuals with type 2 diabetes. Animal models have shown that treatment with this compound analogs resulted in increased insulin-positive cells and improved glycemic control .

    Clinical Efficacy

    Numerous clinical trials have demonstrated the efficacy of this compound in reducing blood glucose levels and improving glycemic control. Key findings include:

    StudyPopulationInterventionOutcome
    CompoSIT-IPatients on insulin therapyThis compound + InsulinGreater reduction in blood glucose compared to discontinuation of this compound
    Efficacy StudyOlder adults with T2DThis compound treatmentSignificant improvement in fasting plasma glucose (FPG) and HbA1c levels
    Pharmacodynamics StudyPatients with T2DSingle doses of this compoundDose-dependent inhibition of DPP-4 activity, increased active GLP-1 levels, and reduced glycemic excursions

    Direct Effects on Intestinal L Cells

    Recent research has uncovered DPP-IV-independent effects of this compound on intestinal L cells. This compound has been shown to activate cAMP and ERK1/2 signaling pathways, leading to increased GLP-1 secretion from these cells. In vitro studies using murine GLUTag and human hNCI-H716 cells revealed that this compound significantly stimulated GLP-1 secretion without feedback inhibition from GLP-1 itself .

    Safety Profile

    This compound is generally well-tolerated among patients with type 2 diabetes. Clinical studies have reported minimal adverse effects, with no significant hypoglycemic events when used as directed. The long-term safety profile continues to be assessed through ongoing clinical trials.

    Case Studies

    • Case Study on Cardiovascular Safety : A pooled analysis of 20 clinical trials involving saxagliptin (a related DPP-4 inhibitor) indicated no increased risk for major adverse cardiovascular events (MACE) when compared to placebo or other treatments . This finding supports the cardiovascular safety profile of DPP-4 inhibitors like this compound.
    • Beta Cell Function Improvement : In a study evaluating the effects of this compound versus sulfonylurea intensification, results showed that patients receiving this compound had better preservation of beta-cell function over time compared to those receiving traditional therapies .

    Q & A

    Basic Research Questions

    Q. What experimental design considerations are critical for evaluating Sitagliptin's cardiovascular safety in randomized controlled trials (RCTs)?

    • Methodological Answer : Non-inferiority trials with large sample sizes (e.g., >14,000 participants) are essential, using composite endpoints like cardiovascular death, myocardial infarction, stroke, or unstable angina hospitalization. Key parameters include:

    • Non-inferiority margin : A relative risk threshold (e.g., ≤1.3) .
    • Glycemic control monitoring : Track HbA1c differences (e.g., -0.29% vs. placebo) to isolate cardiovascular effects from glucose-lowering benefits .
    • Longitudinal follow-up : Median 3-year follow-up ensures detection of delayed cardiovascular outcomes .

    Q. How do researchers address conflicting results between preclinical models and clinical trial data for this compound's efficacy?

    • Methodological Answer : Validate predictive models using standardized tools like the ISPOR-AMCP-NPC questionnaire to identify discrepancies in assumptions (e.g., QALY rankings or cardiovascular risk projections). For example:

    • Model comparison : CDC/RTI and ARCHeS models showed divergent QALY rankings for this compound vs. exenatide due to differing data inputs and discount rates .
    • Sensitivity analysis : Test model robustness by varying parameters like cardiovascular event incidence (49.8% vs. 44.7% across models) .

    Advanced Research Questions

    Q. How can researchers reconcile discrepancies in cardiovascular risk predictions between observational studies and RCTs for this compound?

    • Methodological Answer : Apply the UKPDS Risk Engine in real-world observational studies to standardize risk estimation. Key steps include:

    • Covariate adjustment : Use ANCOVA to control for baseline differences (e.g., HbA1c, age) .
    • Long-term risk evolution : Track risk reductions over ≥48 months, with statistical validation via t-tests (e.g., p<0.0001 for gender differences) .
    • Log-transformation : Normalize skewed risk factor distributions (e.g., log10 transformation of UKPDS risk scores) .

    Q. What statistical approaches are optimal for analyzing this compound's heterogeneous effects in subpopulations (e.g., T1D with nephropathy)?

    • Methodological Answer : Stratify analyses using parametric/non-parametric tests based on data distribution:

    • Normality testing : Kolmogorov-Smirnov test to determine appropriate statistical methods (e.g., paired t-tests vs. Wilcoxon signed-rank tests) .
    • Covariate-adjusted models : Use ANCOVA to isolate treatment effects from confounders like baseline HbA1c .

    Q. How should researchers design studies to assess this compound's pancreatic safety profile given contradictory preclinical signals?

    • Methodological Answer : Pooled safety analyses from phase 2B/3 trials with standardized adverse event (AE) reporting:

    • AE harmonization : Compare pancreatitis and pancreatic cancer rates using Fisher’s exact test (e.g., p=0.07 for pancreatitis) .
    • Post-hoc adjustments : Control for exposure duration and concomitant medications (e.g., metformin or sulfonylureas) .

    Data Analysis & Interpretation

    Q. What methods resolve contradictions in this compound's cost-effectiveness across health economic models?

    • Methodological Answer : Conduct cross-model validation using domain-specific questionnaires (e.g., ISPOR-AMCP-NPC) to identify methodological divergences:

    • Parameter alignment : Compare discount rates (e.g., 3% vs. 5%) and time horizons (e.g., 15-year projections) .
    • Scenario testing : Rank-order therapies under varying assumptions (e.g., QALY differences between this compound and glyburide) .

    Q. How can meta-analyses address heterogeneity in this compound's glycemic outcomes across trials?

    • Methodological Answer : Use random-effects models to account for variability in study populations and designs:

    • Subgroup analysis : Stratify by diabetes duration, baseline HbA1c, or comedications (e.g., metformin vs. sulfonylureas) .
    • Publication bias assessment : Funnel plots and Egger’s regression to detect selective reporting .

    Research Ethics & Reporting

    Q. What guidelines ensure reproducibility of this compound pharmacokinetic studies?

    • Methodological Answer : Adhere to journal-specific protocols for experimental reporting:

    • Detailed synthesis : Provide full characterization data for reference standards (e.g., Oxo this compound’s regulatory-compliant profiles) .
    • Data transparency : Deposit raw datasets in repositories like Dryad or Figshare, with metadata on analytical conditions .

    Q. How should researchers frame hypotheses to avoid commercial bias in this compound studies?

    • Methodological Answer : Formulate PICOT-structured questions emphasizing mechanistic or comparative outcomes:

    • PICOT framework : Define Population (e.g., T2D with CVD), Intervention (this compound 100 mg/day), Comparator (placebo/active control), Outcome (HbA1c reduction), Time (3-year follow-up) .
    • Conflict disclosure : Explicitly state funding sources (e.g., industry vs. independent grants) .

    Retrosynthesis Analysis

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    Feasible Synthetic Routes

    Reactant of Route 1
    Sitagliptin
    Reactant of Route 2
    Reactant of Route 2
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